WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y59A8B.6.1 Sequence Name  Y59A8B.6.1
Length (nt)  3043   Chromosome Location  V: 18022479-18042353
Chromosome . Primary Identifier  V Chromosome Location . Start  18022479
Chromosome Location . End  18042353 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59A8B.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013343 prp-6 Y59A8B.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y59A8B.6 Y59A8B.6 2907   V: 18022487-18022583

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y59A8B.6.1 18022479 18042353 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon214975   105   V: 18022479-18022583 Caenorhabditis elegans
Exon214976   301   V: 18023837-18024137 Caenorhabditis elegans
Exon214979   94   V: 18025396-18025489 Caenorhabditis elegans
Exon214980   238   V: 18026585-18026822 Caenorhabditis elegans
Exon214981   385   V: 18028943-18029327 Caenorhabditis elegans
Exon214982   532   V: 18030450-18030981 Caenorhabditis elegans
Exon214983   200   V: 18032887-18033086 Caenorhabditis elegans
Exon214984   261   V: 18034543-18034803 Caenorhabditis elegans
Exon214985   178   V: 18036132-18036309 Caenorhabditis elegans
Exon214991   226   V: 18037739-18037964 Caenorhabditis elegans
Exon214994   137   V: 18040535-18040671 Caenorhabditis elegans
Exon214995   105   V: 18041171-18041275 Caenorhabditis elegans
Exon214996   281   V: 18042073-18042353 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y59A8B.6.1 18022479 18042353 1

1 Sequence

Length
3043

1 Sequence Ontology Term

Identifier Name Description
transcript