WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y59A8B.10d.1 Sequence Name  Y59A8B.10d.1
Length (nt)  1632   Chromosome Location  V: 18070021-18081957
Chromosome . Primary Identifier  V Chromosome Location . Start  18070021
Chromosome Location . End  18081957 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59A8B.10d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013347 nova-1 Y59A8B.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y59A8B.10d Y59A8B.10d 1254   V: 18070272-18070289

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y59A8B.10d.1 18070021 18081957 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon215021   269   V: 18070021-18070289 Caenorhabditis elegans
Exon215027   189   V: 18071863-18072051 Caenorhabditis elegans
Exon215031   453   V: 18073196-18073648 Caenorhabditis elegans
Exon215034   326   V: 18075368-18075693 Caenorhabditis elegans
Exon215037   261   V: 18077200-18077460 Caenorhabditis elegans
Exon215041   134   V: 18081824-18081957 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y59A8B.10d.1 18070021 18081957 -1

1 Sequence

Length
1632

1 Sequence Ontology Term

Identifier Name Description
transcript