WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y59A8B.11c.1 Sequence Name  Y59A8B.11c.1
Length (nt)  1049   Chromosome Location  V: 18082402-18085199
Chromosome . Primary Identifier  V Chromosome Location . Start  18082402
Chromosome Location . End  18085199 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59A8B.11c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013348 fbxa-106 Y59A8B.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y59A8B.11c Y59A8B.11c 921   V: 18082458-18082646

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y59A8B.11c.1 18082402 18085199 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon215097   245   V: 18082402-18082646 Caenorhabditis elegans
Exon215102   493   V: 18082692-18083184 Caenorhabditis elegans
Exon215108   105   V: 18083230-18083334 Caenorhabditis elegans
Exon215113   88   V: 18083384-18083471 Caenorhabditis elegans
Exon215117   118   V: 18085082-18085199 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y59A8B.11c.1 18082402 18085199 -1

1 Sequence

Length
1049

1 Sequence Ontology Term

Identifier Name Description
transcript