WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C31G12.4a.1 Sequence Name  C31G12.4a.1
Length (nt)  2723   Chromosome Location  V: 18172455-18178759
Chromosome . Primary Identifier  V Chromosome Location . Start  18172455
Chromosome Location . End  18178759 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C31G12.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007853 C31G12.4 C31G12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C31G12.4a C31G12.4a 2481   V: 18172492-18172497

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C31G12.4a.1 18172455 18178759 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon215282   43   V: 18172455-18172497 Caenorhabditis elegans
Exon215285   1752   V: 18172547-18174298 Caenorhabditis elegans
Exon215299   133   V: 18176764-18176896 Caenorhabditis elegans
Exon215301   130   V: 18176944-18177073 Caenorhabditis elegans
Exon215303   386   V: 18177618-18178003 Caenorhabditis elegans
Exon215306   178   V: 18178059-18178236 Caenorhabditis elegans
Exon215307   101   V: 18178659-18178759 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C31G12.4a.1 18172455 18178759 -1

1 Sequence

Length
2723

1 Sequence Ontology Term

Identifier Name Description
transcript