WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16H6.4b.1 Sequence Name  F16H6.4b.1
Length (nt)  1643   Chromosome Location  V: 18198721-18205815
Chromosome . Primary Identifier  V Chromosome Location . Start  18198721
Chromosome Location . End  18205815 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16H6.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008894 F16H6.4 F16H6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16H6.4b F16H6.4b 1305   V: 18198721-18198729

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16H6.4b.1 18198721 18205815 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon215336   9   V: 18198721-18198729 Caenorhabditis elegans
Exon215338   190   V: 18198867-18199056 Caenorhabditis elegans
Exon215340   89   V: 18199339-18199427 Caenorhabditis elegans
Exon215342   257   V: 18199473-18199729 Caenorhabditis elegans
Exon215344   81   V: 18200670-18200750 Caenorhabditis elegans
Exon215346   118   V: 18201456-18201573 Caenorhabditis elegans
Exon215348   163   V: 18201841-18202003 Caenorhabditis elegans
Exon215350   86   V: 18202055-18202140 Caenorhabditis elegans
Exon215352   257   V: 18202187-18202443 Caenorhabditis elegans
Exon215354   356   V: 18205372-18205727 Caenorhabditis elegans
Exon215355   37   V: 18205779-18205815 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16H6.4b.1 18198721 18205815 1

1 Sequence

Length
1643

1 Sequence Ontology Term

Identifier Name Description
transcript