WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R10E8.8.2 Sequence Name  R10E8.8.2
Length (nt)  1183   Chromosome Location  V: 18238109-18241670
Chromosome . Primary Identifier  V Chromosome Location . Start  18238109
Chromosome Location . End  18241670 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10E8.8.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011213 R10E8.8 R10E8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10E8.8 R10E8.8 885   V: 18238325-18238397

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R10E8.8.2 18238109 18241670 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon215400   289   V: 18238109-18238397 Caenorhabditis elegans
Exon215403   84   V: 18238730-18238813 Caenorhabditis elegans
Exon215405   86   V: 18238870-18238955 Caenorhabditis elegans
Exon215407   138   V: 18239441-18239578 Caenorhabditis elegans
Exon215409   511   V: 18240226-18240736 Caenorhabditis elegans
Exon215410   75   V: 18241596-18241670 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R10E8.8.2 18238109 18241670 -1

1 Sequence

Length
1183

1 Sequence Ontology Term

Identifier Name Description
transcript