WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R10E8.1a Sequence Name  R10E8.1a
Length (nt)  939   Chromosome Location  V: 18242616-18242645
Chromosome . Primary Identifier  V Chromosome Location . Start  18242616
Chromosome Location . End  18242645
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10E8.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35603 R10E8.1, isoform a 35.6 312 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00001559
WBRNAi00051719
WBRNAi00022422

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R10E8.1a 18242616 18242645 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011207 R10E8.1 R10E8.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:R10E8.1a 18242616 18242645 -1
CDS:R10E8.1a 18242699 18242932 -1
CDS:R10E8.1a 18242979 18243636 -1
CDS:R10E8.1a 18243705 18243721 -1

1 Sequence

Length
939

1 Sequence Ontology Term

Identifier Name Description
CDS  

6 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R10E8.1a.5 R10E8.1a.5 2360   V: 18242323-18249502
Transcript:R10E8.1a.2 R10E8.1a.2 1366   V: 18242323-18252397
Transcript:R10E8.1a.4 R10E8.1a.4 2291   V: 18242323-18252319
Transcript:R10E8.1a.3 R10E8.1a.3 2317   V: 18242323-18252325
Transcript:R10E8.1a.6 R10E8.1a.6 1527   V: 18242323-18247680
Transcript:R10E8.1a.1 R10E8.1a.1 1275   V: 18242339-18243780