WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R10E8.1a.5 Sequence Name  R10E8.1a.5
Length (nt)  2360   Chromosome Location  V: 18242323-18249502
Chromosome . Primary Identifier  V Chromosome Location . Start  18242323
Chromosome Location . End  18249502 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10E8.1a.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011207 R10E8.1 R10E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10E8.1a R10E8.1a 939   V: 18242616-18242645

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R10E8.1a.5 18242323 18249502 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon215466   323   V: 18242323-18242645 Caenorhabditis elegans
Exon215476   234   V: 18242699-18242932 Caenorhabditis elegans
Exon215483   658   V: 18242979-18243636 Caenorhabditis elegans
Exon215489   70   V: 18243705-18243774 Caenorhabditis elegans
Exon215496   236   V: 18247439-18247674 Caenorhabditis elegans
Exon215503   321   V: 18248586-18248906 Caenorhabditis elegans
Exon215509   518   V: 18248985-18249502 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R10E8.1a.5 18242323 18249502 -1

1 Sequence

Length
2360

1 Sequence Ontology Term

Identifier Name Description
transcript