WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R10E8.6.1 Sequence Name  R10E8.6.1
Length (nt)  5012   Chromosome Location  V: 18259260-18266391
Chromosome . Primary Identifier  V Chromosome Location . Start  18259260
Chromosome Location . End  18266391 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10E8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011212 R10E8.6 R10E8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10E8.6 R10E8.6 4944   V: 18259301-18259558

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R10E8.6.1 18259260 18266391 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon215524   299   V: 18259260-18259558 Caenorhabditis elegans
Exon215525   706   V: 18259605-18260310 Caenorhabditis elegans
Exon215526   101   V: 18260360-18260460 Caenorhabditis elegans
Exon215527   928   V: 18260633-18261560 Caenorhabditis elegans
Exon215528   47   V: 18261630-18261676 Caenorhabditis elegans
Exon215529   240   V: 18261992-18262231 Caenorhabditis elegans
Exon215530   685   V: 18262283-18262967 Caenorhabditis elegans
Exon215531   272   V: 18263173-18263444 Caenorhabditis elegans
Exon215532   679   V: 18263487-18264165 Caenorhabditis elegans
Exon215533   269   V: 18264991-18265259 Caenorhabditis elegans
Exon215534   703   V: 18265314-18266016 Caenorhabditis elegans
Exon215535   83   V: 18266309-18266391 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R10E8.6.1 18259260 18266391 -1

1 Sequence

Length
5012

1 Sequence Ontology Term

Identifier Name Description
transcript