WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51A2D.19e.1 Sequence Name  Y51A2D.19e.1
Length (nt)  3785   Chromosome Location  V: 18492261-18508212
Chromosome . Primary Identifier  V Chromosome Location . Start  18492261
Chromosome Location . End  18508212 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51A2D.19e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004830 slo-1 Y51A2D.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51A2D.19e Y51A2D.19e 3462   V: 18492306-18492460

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.19e.1 18492261 18508212 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon215784   200   V: 18492261-18492460 Caenorhabditis elegans
Exon215801   211   V: 18493131-18493341 Caenorhabditis elegans
Exon215815   119   V: 18495017-18495135 Caenorhabditis elegans
Exon215828   103   V: 18495292-18495394 Caenorhabditis elegans
Exon215841   112   V: 18495556-18495667 Caenorhabditis elegans
Exon215854   323   V: 18495990-18496312 Caenorhabditis elegans
Exon215867   309   V: 18497242-18497550 Caenorhabditis elegans
Exon215880   309   V: 18498535-18498843 Caenorhabditis elegans
Exon215891   113   V: 18499582-18499694 Caenorhabditis elegans
Exon215906   236   V: 18501000-18501235 Caenorhabditis elegans
Exon215919   45   V: 18501935-18501979 Caenorhabditis elegans
Exon215933   39   V: 18502068-18502106 Caenorhabditis elegans
Exon215941   103   V: 18502793-18502895 Caenorhabditis elegans
Exon215953   66   V: 18503101-18503166 Caenorhabditis elegans
Exon215961   85   V: 18504147-18504231 Caenorhabditis elegans
Exon215974   300   V: 18504832-18505131 Caenorhabditis elegans
Exon215987   283   V: 18505872-18506154 Caenorhabditis elegans
Exon216000   131   V: 18506376-18506506 Caenorhabditis elegans
Exon216013   195   V: 18506886-18507080 Caenorhabditis elegans
Exon216026   162   V: 18507569-18507730 Caenorhabditis elegans
Exon216047   341   V: 18507872-18508212 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.19e.1 18492261 18508212 1

1 Sequence

Length
3785

1 Sequence Ontology Term

Identifier Name Description
transcript