WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51A2D.19f.1 Sequence Name  Y51A2D.19f.1
Length (nt)  3423   Chromosome Location  V: 18492306-18507934
Chromosome . Primary Identifier  V Chromosome Location . Start  18492306
Chromosome Location . End  18507934 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51A2D.19f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004830 slo-1 Y51A2D.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51A2D.19f Y51A2D.19f 3423   V: 18492306-18492460

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.19f.1 18492306 18507934 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon215843   155   V: 18492306-18492460 Caenorhabditis elegans
Exon215856   211   V: 18493131-18493341 Caenorhabditis elegans
Exon215870   119   V: 18495017-18495135 Caenorhabditis elegans
Exon215883   103   V: 18495292-18495394 Caenorhabditis elegans
Exon215896   112   V: 18495556-18495667 Caenorhabditis elegans
Exon215909   323   V: 18495990-18496312 Caenorhabditis elegans
Exon215922   309   V: 18497242-18497550 Caenorhabditis elegans
Exon215935   309   V: 18498535-18498843 Caenorhabditis elegans
Exon215946   113   V: 18499582-18499694 Caenorhabditis elegans
Exon215961   236   V: 18501000-18501235 Caenorhabditis elegans
Exon215974   45   V: 18501935-18501979 Caenorhabditis elegans
Exon215996   103   V: 18502793-18502895 Caenorhabditis elegans
Exon216008   66   V: 18503101-18503166 Caenorhabditis elegans
Exon216016   85   V: 18504147-18504231 Caenorhabditis elegans
Exon216029   300   V: 18504832-18505131 Caenorhabditis elegans
Exon216042   283   V: 18505872-18506154 Caenorhabditis elegans
Exon216055   131   V: 18506376-18506506 Caenorhabditis elegans
Exon216068   195   V: 18506886-18507080 Caenorhabditis elegans
Exon216081   162   V: 18507569-18507730 Caenorhabditis elegans
Exon216089   63   V: 18507872-18507934 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.19f.1 18492306 18507934 1

1 Sequence

Length
3423

1 Sequence Ontology Term

Identifier Name Description
transcript