WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51A2D.19m.1 Sequence Name  Y51A2D.19m.1
Length (nt)  3441   Chromosome Location  V: 18492306-18507934
Chromosome . Primary Identifier  V Chromosome Location . Start  18492306
Chromosome Location . End  18507934 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51A2D.19m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004830 slo-1 Y51A2D.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51A2D.19m Y51A2D.19m 3441   V: 18492306-18492460

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.19m.1 18492306 18507934 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon215795   155   V: 18492306-18492460 Caenorhabditis elegans
Exon215809   211   V: 18493131-18493341 Caenorhabditis elegans
Exon215810   45   V: 18493547-18493591 Caenorhabditis elegans
Exon215823   119   V: 18495017-18495135 Caenorhabditis elegans
Exon215836   103   V: 18495292-18495394 Caenorhabditis elegans
Exon215849   112   V: 18495556-18495667 Caenorhabditis elegans
Exon215862   323   V: 18495990-18496312 Caenorhabditis elegans
Exon215875   309   V: 18497242-18497550 Caenorhabditis elegans
Exon215888   309   V: 18498535-18498843 Caenorhabditis elegans
Exon215901   113   V: 18500551-18500663 Caenorhabditis elegans
Exon215914   236   V: 18501000-18501235 Caenorhabditis elegans
Exon215927   45   V: 18501935-18501979 Caenorhabditis elegans
Exon215936   39   V: 18502068-18502106 Caenorhabditis elegans
Exon215949   103   V: 18502793-18502895 Caenorhabditis elegans
Exon215969   85   V: 18504147-18504231 Caenorhabditis elegans
Exon215982   300   V: 18504832-18505131 Caenorhabditis elegans
Exon215995   283   V: 18505872-18506154 Caenorhabditis elegans
Exon216008   131   V: 18506376-18506506 Caenorhabditis elegans
Exon216021   195   V: 18506886-18507080 Caenorhabditis elegans
Exon216034   162   V: 18507569-18507730 Caenorhabditis elegans
Exon216041   63   V: 18507872-18507934 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.19m.1 18492306 18507934 1

1 Sequence

Length
3441

1 Sequence Ontology Term

Identifier Name Description
transcript