WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51A2D.4.1 Sequence Name  Y51A2D.4.1
Length (nt)  2091   Chromosome Location  V: 18516789-18523875
Chromosome . Primary Identifier  V Chromosome Location . Start  18516789
Chromosome Location . End  18523875 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51A2D.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013073 hmit-1.1 Y51A2D.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51A2D.4 Y51A2D.4 1821   V: 18516880-18516891

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.4.1 18516789 18523875 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216059   103   V: 18516789-18516891 Caenorhabditis elegans
Exon216060   214   V: 18517517-18517730 Caenorhabditis elegans
Exon216061   204   V: 18518284-18518487 Caenorhabditis elegans
Exon216062   248   V: 18519199-18519446 Caenorhabditis elegans
Exon216063   521   V: 18520165-18520685 Caenorhabditis elegans
Exon216064   137   V: 18521213-18521349 Caenorhabditis elegans
Exon216065   350   V: 18522185-18522534 Caenorhabditis elegans
Exon216066   314   V: 18523562-18523875 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.4.1 18516789 18523875 1

1 Sequence

Length
2091

1 Sequence Ontology Term

Identifier Name Description
transcript