WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51A2D.5.1 Sequence Name  Y51A2D.5.1
Length (nt)  2252   Chromosome Location  V: 18524760-18529156
Chromosome . Primary Identifier  V Chromosome Location . Start  18524760
Chromosome Location . End  18529156 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51A2D.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013074 hmit-1.2 Y51A2D.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51A2D.5 Y51A2D.5 1842   V: 18524894-18525122

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.5.1 18524760 18529156 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216067   363   V: 18524760-18525122 Caenorhabditis elegans
Exon216069   204   V: 18525355-18525558 Caenorhabditis elegans
Exon216070   354   V: 18525971-18526324 Caenorhabditis elegans
Exon216072   582   V: 18526739-18527320 Caenorhabditis elegans
Exon216074   341   V: 18527885-18528225 Caenorhabditis elegans
Exon216075   408   V: 18528749-18529156 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.5.1 18524760 18529156 1

1 Sequence

Length
2252

1 Sequence Ontology Term

Identifier Name Description
transcript