WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51A2D.7b.1 Sequence Name  Y51A2D.7b.1
Length (nt)  3261   Chromosome Location  V: 18533953-18549101
Chromosome . Primary Identifier  V Chromosome Location . Start  18533953
Chromosome Location . End  18549101 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51A2D.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013075 ints-5 Y51A2D.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51A2D.7b Y51A2D.7b 3174   V: 18533963-18534025

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.7b.1 18533953 18549101 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216079   73   V: 18533953-18534025 Caenorhabditis elegans
Exon216081   247   V: 18534144-18534390 Caenorhabditis elegans
Exon216083   107   V: 18534476-18534582 Caenorhabditis elegans
Exon216085   245   V: 18536093-18536337 Caenorhabditis elegans
Exon216087   235   V: 18537356-18537590 Caenorhabditis elegans
Exon216089   136   V: 18537802-18537937 Caenorhabditis elegans
Exon216091   183   V: 18538854-18539036 Caenorhabditis elegans
Exon216093   217   V: 18539254-18539470 Caenorhabditis elegans
Exon216095   115   V: 18540397-18540511 Caenorhabditis elegans
Exon216097   324   V: 18540609-18540932 Caenorhabditis elegans
Exon216100   208   V: 18541604-18541811 Caenorhabditis elegans
Exon216102   365   V: 18542729-18543093 Caenorhabditis elegans
Exon216104   191   V: 18543843-18544033 Caenorhabditis elegans
Exon216106   319   V: 18547492-18547810 Caenorhabditis elegans
Exon216109   296   V: 18548806-18549101 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.7b.1 18533953 18549101 1

1 Sequence

Length
3261

1 Sequence Ontology Term

Identifier Name Description
transcript