WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51A2D.8.1 Sequence Name  Y51A2D.8.1
Length (nt)  1214   Chromosome Location  V: 18550003-18553850
Chromosome . Primary Identifier  V Chromosome Location . Start  18550003
Chromosome Location . End  18553850 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51A2D.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013076 Y51A2D.8 Y51A2D.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51A2D.8 Y51A2D.8 1161   V: 18550052-18550335

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.8.1 18550003 18553850 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216110   333   V: 18550003-18550335 Caenorhabditis elegans
Exon216111   91   V: 18551040-18551130 Caenorhabditis elegans
Exon216112   195   V: 18551258-18551452 Caenorhabditis elegans
Exon216113   364   V: 18552497-18552860 Caenorhabditis elegans
Exon216114   81   V: 18553219-18553299 Caenorhabditis elegans
Exon216115   150   V: 18553701-18553850 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.8.1 18550003 18553850 -1

1 Sequence

Length
1214

1 Sequence Ontology Term

Identifier Name Description
transcript