WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51A2D.7b.1 Sequence Name  Y51A2D.7b.1
Length (nt)  3261   Chromosome Location  V: 18533953-18549101
Chromosome . Primary Identifier  V Chromosome Location . Start  18533953
Chromosome Location . End  18549101 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51A2D.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013075 ints-5 Y51A2D.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51A2D.7b Y51A2D.7b 3174   V: 18533963-18534025

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.7b.1 18533953 18549101 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216133   73   V: 18533953-18534025 Caenorhabditis elegans
Exon216135   247   V: 18534144-18534390 Caenorhabditis elegans
Exon216137   107   V: 18534476-18534582 Caenorhabditis elegans
Exon216139   245   V: 18536093-18536337 Caenorhabditis elegans
Exon216141   235   V: 18537356-18537590 Caenorhabditis elegans
Exon216143   136   V: 18537802-18537937 Caenorhabditis elegans
Exon216145   183   V: 18538854-18539036 Caenorhabditis elegans
Exon216147   217   V: 18539254-18539470 Caenorhabditis elegans
Exon216149   115   V: 18540397-18540511 Caenorhabditis elegans
Exon216151   324   V: 18540609-18540932 Caenorhabditis elegans
Exon216154   208   V: 18541604-18541811 Caenorhabditis elegans
Exon216156   365   V: 18542729-18543093 Caenorhabditis elegans
Exon216158   191   V: 18543843-18544033 Caenorhabditis elegans
Exon216160   319   V: 18547492-18547810 Caenorhabditis elegans
Exon216163   296   V: 18548806-18549101 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.7b.1 18533953 18549101 1

1 Sequence

Length
3261

1 Sequence Ontology Term

Identifier Name Description
transcript