WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69H2.2.1 Sequence Name  Y69H2.2.1
Length (nt)  2966   Chromosome Location  V: 18628655-18636348
Chromosome . Primary Identifier  V Chromosome Location . Start  18628655
Chromosome Location . End  18636348 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69H2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013480 egas-3 Y69H2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69H2.2 Y69H2.2 2766   V: 18628680-18628811

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y69H2.2.1 18628655 18636348 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216258   157   V: 18628655-18628811 Caenorhabditis elegans
Exon216259   126   V: 18628859-18628984 Caenorhabditis elegans
Exon216260   234   V: 18629658-18629891 Caenorhabditis elegans
Exon216261   96   V: 18630245-18630340 Caenorhabditis elegans
Exon216262   161   V: 18630391-18630551 Caenorhabditis elegans
Exon216263   107   V: 18630601-18630707 Caenorhabditis elegans
Exon216264   155   V: 18631420-18631574 Caenorhabditis elegans
Exon216265   62   V: 18631622-18631683 Caenorhabditis elegans
Exon216266   156   V: 18631733-18631888 Caenorhabditis elegans
Exon216267   114   V: 18631937-18632050 Caenorhabditis elegans
Exon216268   126   V: 18632360-18632485 Caenorhabditis elegans
Exon216269   114   V: 18632542-18632655 Caenorhabditis elegans
Exon216270   264   V: 18632745-18633008 Caenorhabditis elegans
Exon216271   156   V: 18633420-18633575 Caenorhabditis elegans
Exon216272   150   V: 18634160-18634309 Caenorhabditis elegans
Exon216273   135   V: 18634405-18634539 Caenorhabditis elegans
Exon216274   123   V: 18635220-18635342 Caenorhabditis elegans
Exon216275   120   V: 18635410-18635529 Caenorhabditis elegans
Exon216276   410   V: 18635939-18636348 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y69H2.2.1 18628655 18636348 -1

1 Sequence

Length
2966

1 Sequence Ontology Term

Identifier Name Description
transcript