WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69H2.15.1 Sequence Name  Y69H2.15.1
Length (nt)  1509   Chromosome Location  V: 18623107-18626864
Chromosome . Primary Identifier  V Chromosome Location . Start  18623107
Chromosome Location . End  18626864 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69H2.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00050884 Y69H2.15 Y69H2.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69H2.15 Y69H2.15 1371   V: 18623233-18623333

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69H2.15.1 18623107 18626864 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216302   227   V: 18623107-18623333 Caenorhabditis elegans
Exon216303   164   V: 18623380-18623543 Caenorhabditis elegans
Exon216304   122   V: 18624238-18624359 Caenorhabditis elegans
Exon216305   201   V: 18624411-18624611 Caenorhabditis elegans
Exon216306   89   V: 18625090-18625178 Caenorhabditis elegans
Exon216307   97   V: 18625223-18625319 Caenorhabditis elegans
Exon216308   96   V: 18625534-18625629 Caenorhabditis elegans
Exon216309   297   V: 18625864-18626160 Caenorhabditis elegans
Exon216310   114   V: 18626550-18626663 Caenorhabditis elegans
Exon216311   102   V: 18626763-18626864 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69H2.15.1 18623107 18626864 -1

1 Sequence

Length
1509

1 Sequence Ontology Term

Identifier Name Description
transcript