WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69H2.11.1 Sequence Name  Y69H2.11.1
Length (nt)  2842   Chromosome Location  V: 18640304-18648389
Chromosome . Primary Identifier  V Chromosome Location . Start  18640304
Chromosome Location . End  18648389 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69H2.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013486 egas-1 Y69H2.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69H2.11 Y69H2.11 2769   V: 18640337-18640577

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y69H2.11.1 18640304 18648389 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216279   274   V: 18640304-18640577 Caenorhabditis elegans
Exon216280   120   V: 18640937-18641056 Caenorhabditis elegans
Exon216281   123   V: 18641102-18641224 Caenorhabditis elegans
Exon216282   135   V: 18641916-18642050 Caenorhabditis elegans
Exon216283   150   V: 18642127-18642276 Caenorhabditis elegans
Exon216284   156   V: 18642700-18642855 Caenorhabditis elegans
Exon216285   261   V: 18643266-18643526 Caenorhabditis elegans
Exon216286   114   V: 18644052-18644165 Caenorhabditis elegans
Exon216287   126   V: 18644211-18644336 Caenorhabditis elegans
Exon216288   114   V: 18645055-18645168 Caenorhabditis elegans
Exon216289   153   V: 18645213-18645365 Caenorhabditis elegans
Exon216290   62   V: 18645418-18645479 Caenorhabditis elegans
Exon216291   155   V: 18645527-18645681 Caenorhabditis elegans
Exon216292   107   V: 18646356-18646462 Caenorhabditis elegans
Exon216293   161   V: 18646511-18646671 Caenorhabditis elegans
Exon216294   96   V: 18646719-18646814 Caenorhabditis elegans
Exon216295   237   V: 18647766-18648002 Caenorhabditis elegans
Exon216296   126   V: 18648048-18648173 Caenorhabditis elegans
Exon216297   172   V: 18648218-18648389 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y69H2.11.1 18640304 18648389 1

1 Sequence

Length
2842

1 Sequence Ontology Term

Identifier Name Description
transcript