WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69H2.3j.1 Sequence Name  Y69H2.3j.1
Length (nt)  2612   Chromosome Location  V: 18656090-18664126
Chromosome . Primary Identifier  V Chromosome Location . Start  18656090
Chromosome Location . End  18664126 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69H2.3j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013481 Y69H2.3 Y69H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69H2.3j Y69H2.3j 2481   V: 18656191-18656366

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y69H2.3j.1 18656090 18664126 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216321   277   V: 18656090-18656366 Caenorhabditis elegans
Exon216326   186   V: 18657116-18657301 Caenorhabditis elegans
Exon216330   286   V: 18657359-18657644 Caenorhabditis elegans
Exon216334   139   V: 18657695-18657833 Caenorhabditis elegans
Exon216338   132   V: 18658354-18658485 Caenorhabditis elegans
Exon216342   141   V: 18658531-18658671 Caenorhabditis elegans
Exon216346   120   V: 18658993-18659112 Caenorhabditis elegans
Exon216350   120   V: 18659159-18659278 Caenorhabditis elegans
Exon216354   85   V: 18659336-18659420 Caenorhabditis elegans
Exon216358   54   V: 18659464-18659517 Caenorhabditis elegans
Exon216410   90   V: 18661088-18661177 Caenorhabditis elegans
Exon216417   90   V: 18661622-18661711 Caenorhabditis elegans
Exon216423   195   V: 18662119-18662313 Caenorhabditis elegans
Exon216431   192   V: 18662359-18662550 Caenorhabditis elegans
Exon216442   195   V: 18662617-18662811 Caenorhabditis elegans
Exon216453   136   V: 18663726-18663861 Caenorhabditis elegans
Exon216464   77   V: 18663911-18663987 Caenorhabditis elegans
Exon216477   97   V: 18664030-18664126 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y69H2.3j.1 18656090 18664126 -1

1 Sequence

Length
2612

1 Sequence Ontology Term

Identifier Name Description
transcript