WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69H2.3c.1 Sequence Name  Y69H2.3c.1
Length (nt)  2312   Chromosome Location  V: 18656095-18664116
Chromosome . Primary Identifier  V Chromosome Location . Start  18656095
Chromosome Location . End  18664116 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69H2.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013481 Y69H2.3 Y69H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69H2.3c Y69H2.3c 2196   V: 18656191-18656366

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y69H2.3c.1 18656095 18664116 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216323   272   V: 18656095-18656366 Caenorhabditis elegans
Exon216325   186   V: 18657116-18657301 Caenorhabditis elegans
Exon216329   286   V: 18657359-18657644 Caenorhabditis elegans
Exon216333   139   V: 18657695-18657833 Caenorhabditis elegans
Exon216337   132   V: 18658354-18658485 Caenorhabditis elegans
Exon216341   141   V: 18658531-18658671 Caenorhabditis elegans
Exon216345   120   V: 18658993-18659112 Caenorhabditis elegans
Exon216349   120   V: 18659159-18659278 Caenorhabditis elegans
Exon216353   85   V: 18659336-18659420 Caenorhabditis elegans
Exon216357   54   V: 18659464-18659517 Caenorhabditis elegans
Exon216404   90   V: 18661088-18661177 Caenorhabditis elegans
Exon216427   192   V: 18662359-18662550 Caenorhabditis elegans
Exon216436   195   V: 18662617-18662811 Caenorhabditis elegans
Exon216447   136   V: 18663726-18663861 Caenorhabditis elegans
Exon216458   77   V: 18663911-18663987 Caenorhabditis elegans
Exon216470   87   V: 18664030-18664116 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y69H2.3c.1 18656095 18664116 -1

1 Sequence

Length
2312

1 Sequence Ontology Term

Identifier Name Description
transcript