WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69H2.12.1 Sequence Name  Y69H2.12.1
Length (nt)  2760   Chromosome Location  V: 18650343-18656165
Chromosome . Primary Identifier  V Chromosome Location . Start  18650343
Chromosome Location . End  18656165 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69H2.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013487 egas-2 Y69H2.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69H2.12 Y69H2.12 2760   V: 18650343-18650580

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y69H2.12.1 18650343 18656165 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216354   238   V: 18650343-18650580 Caenorhabditis elegans
Exon216355   246   V: 18651008-18651253 Caenorhabditis elegans
Exon216356   135   V: 18651989-18652123 Caenorhabditis elegans
Exon216357   150   V: 18652176-18652325 Caenorhabditis elegans
Exon216358   156   V: 18652381-18652536 Caenorhabditis elegans
Exon216361   264   V: 18653286-18653549 Caenorhabditis elegans
Exon216362   114   V: 18653596-18653709 Caenorhabditis elegans
Exon216363   126   V: 18653765-18653890 Caenorhabditis elegans
Exon216364   114   V: 18653944-18654057 Caenorhabditis elegans
Exon216365   153   V: 18654099-18654251 Caenorhabditis elegans
Exon216366   62   V: 18654311-18654372 Caenorhabditis elegans
Exon216367   155   V: 18654419-18654573 Caenorhabditis elegans
Exon216368   107   V: 18654636-18654742 Caenorhabditis elegans
Exon216369   161   V: 18654791-18654951 Caenorhabditis elegans
Exon216370   96   V: 18654999-18655094 Caenorhabditis elegans
Exon216371   234   V: 18655587-18655820 Caenorhabditis elegans
Exon216372   126   V: 18655873-18655998 Caenorhabditis elegans
Exon216373   123   V: 18656043-18656165 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y69H2.12.1 18650343 18656165 1

1 Sequence

Length
2760

1 Sequence Ontology Term

Identifier Name Description
transcript