WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69H2.3g.1 Sequence Name  Y69H2.3g.1
Length (nt)  1411   Chromosome Location  V: 18659593-18664118
Chromosome . Primary Identifier  V Chromosome Location . Start  18659593
Chromosome Location . End  18664118 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69H2.3g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013481 Y69H2.3 Y69H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69H2.3g Y69H2.3g 1284   V: 18659698-18659820

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69H2.3g.1 18659593 18664118 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216365   228   V: 18659593-18659820 Caenorhabditis elegans
Exon216370   121   V: 18660070-18660190 Caenorhabditis elegans
Exon216377   73   V: 18660235-18660307 Caenorhabditis elegans
Exon216384   206   V: 18660459-18660664 Caenorhabditis elegans
Exon216391   73   V: 18660720-18660792 Caenorhabditis elegans
Exon216395   123   V: 18660843-18660965 Caenorhabditis elegans
Exon216407   90   V: 18661088-18661177 Caenorhabditis elegans
Exon216439   195   V: 18662617-18662811 Caenorhabditis elegans
Exon216450   136   V: 18663726-18663861 Caenorhabditis elegans
Exon216461   77   V: 18663911-18663987 Caenorhabditis elegans
Exon216474   89   V: 18664030-18664118 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69H2.3g.1 18659593 18664118 -1

1 Sequence

Length
1411

1 Sequence Ontology Term

Identifier Name Description
transcript