WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69H2.3a.1 Sequence Name  Y69H2.3a.1
Length (nt)  1712   Chromosome Location  V: 18659587-18664116
Chromosome . Primary Identifier  V Chromosome Location . Start  18659587
Chromosome Location . End  18664116 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69H2.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013481 Y69H2.3 Y69H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69H2.3a Y69H2.3a 1581   V: 18659698-18659820

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69H2.3a.1 18659587 18664116 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216414   234   V: 18659587-18659820 Caenorhabditis elegans
Exon216421   121   V: 18660070-18660190 Caenorhabditis elegans
Exon216428   73   V: 18660235-18660307 Caenorhabditis elegans
Exon216435   206   V: 18660459-18660664 Caenorhabditis elegans
Exon216442   73   V: 18660720-18660792 Caenorhabditis elegans
Exon216452   138   V: 18660843-18660980 Caenorhabditis elegans
Exon216456   90   V: 18661088-18661177 Caenorhabditis elegans
Exon216467   90   V: 18661622-18661711 Caenorhabditis elegans
Exon216479   192   V: 18662359-18662550 Caenorhabditis elegans
Exon216488   195   V: 18662617-18662811 Caenorhabditis elegans
Exon216499   136   V: 18663726-18663861 Caenorhabditis elegans
Exon216510   77   V: 18663911-18663987 Caenorhabditis elegans
Exon216523   87   V: 18664030-18664116 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69H2.3a.1 18659587 18664116 -1

1 Sequence

Length
1712

1 Sequence Ontology Term

Identifier Name Description
transcript