WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69H2.3i.1 Sequence Name  Y69H2.3i.1
Length (nt)  1698   Chromosome Location  V: 18659588-18664118
Chromosome . Primary Identifier  V Chromosome Location . Start  18659588
Chromosome Location . End  18664118 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69H2.3i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013481 Y69H2.3 Y69H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69H2.3i Y69H2.3i 1566   V: 18659698-18659820

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69H2.3i.1 18659588 18664118 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216417   233   V: 18659588-18659820 Caenorhabditis elegans
Exon216426   121   V: 18660070-18660190 Caenorhabditis elegans
Exon216433   73   V: 18660235-18660307 Caenorhabditis elegans
Exon216440   206   V: 18660459-18660664 Caenorhabditis elegans
Exon216447   73   V: 18660720-18660792 Caenorhabditis elegans
Exon216451   123   V: 18660843-18660965 Caenorhabditis elegans
Exon216463   90   V: 18661088-18661177 Caenorhabditis elegans
Exon216470   90   V: 18661622-18661711 Caenorhabditis elegans
Exon216484   192   V: 18662359-18662550 Caenorhabditis elegans
Exon216495   195   V: 18662617-18662811 Caenorhabditis elegans
Exon216506   136   V: 18663726-18663861 Caenorhabditis elegans
Exon216517   77   V: 18663911-18663987 Caenorhabditis elegans
Exon216529   89   V: 18664030-18664118 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69H2.3i.1 18659588 18664118 -1

1 Sequence

Length
1698

1 Sequence Ontology Term

Identifier Name Description
transcript