WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69H2.10c.1 Sequence Name  Y69H2.10c.1
Length (nt)  2691   Chromosome Location  V: 18670328-18684378
Chromosome . Primary Identifier  V Chromosome Location . Start  18670328
Chromosome Location . End  18684378 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69H2.10c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013485 Y69H2.10 Y69H2.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69H2.10c Y69H2.10c 1224   V: 18678116-18678192

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69H2.10c.1 18670328 18684378 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216481   78   V: 18670328-18670405 Caenorhabditis elegans
Exon216484   783   V: 18671350-18672132 Caenorhabditis elegans
Exon216488   177   V: 18672182-18672358 Caenorhabditis elegans
Exon216492   96   V: 18674409-18674504 Caenorhabditis elegans
Exon216496   275   V: 18674563-18674837 Caenorhabditis elegans
Exon216507   88   V: 18678105-18678192 Caenorhabditis elegans
Exon216509   126   V: 18678255-18678380 Caenorhabditis elegans
Exon216513   132   V: 18678433-18678564 Caenorhabditis elegans
Exon216517   126   V: 18678618-18678743 Caenorhabditis elegans
Exon216521   124   V: 18679052-18679175 Caenorhabditis elegans
Exon216525   286   V: 18679385-18679670 Caenorhabditis elegans
Exon216533   177   V: 18683932-18684108 Caenorhabditis elegans
Exon216540   223   V: 18684156-18684378 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69H2.10c.1 18670328 18684378 1

1 Sequence

Length
2691

1 Sequence Ontology Term

Identifier Name Description
transcript