WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69H2.10c.3 Sequence Name  Y69H2.10c.3
Length (nt)  1830   Chromosome Location  V: 18677544-18684365
Chromosome . Primary Identifier  V Chromosome Location . Start  18677544
Chromosome Location . End  18684365 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69H2.10c.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013485 Y69H2.10 Y69H2.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69H2.10c Y69H2.10c 1224   V: 18678116-18678192

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69H2.10c.3 18677544 18684365 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216504   649   V: 18677544-18678192 Caenorhabditis elegans
Exon216511   126   V: 18678255-18678380 Caenorhabditis elegans
Exon216515   132   V: 18678433-18678564 Caenorhabditis elegans
Exon216519   126   V: 18678618-18678743 Caenorhabditis elegans
Exon216523   124   V: 18679052-18679175 Caenorhabditis elegans
Exon216527   286   V: 18679385-18679670 Caenorhabditis elegans
Exon216535   177   V: 18683932-18684108 Caenorhabditis elegans
Exon216539   210   V: 18684156-18684365 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69H2.10c.3 18677544 18684365 1

1 Sequence

Length
1830

1 Sequence Ontology Term

Identifier Name Description
transcript