WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69H2.7a.1 Sequence Name  Y69H2.7a.1
Length (nt)  1608   Chromosome Location  V: 18690032-18696115
Chromosome . Primary Identifier  V Chromosome Location . Start  18690032
Chromosome Location . End  18696115 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69H2.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013482 Y69H2.7 Y69H2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69H2.7a Y69H2.7a 1428   V: 18690064-18690081

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69H2.7a.1 18690032 18696115 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216556   50   V: 18690032-18690081 Caenorhabditis elegans
Exon216557   157   V: 18690132-18690288 Caenorhabditis elegans
Exon216559   104   V: 18690519-18690622 Caenorhabditis elegans
Exon216562   319   V: 18691470-18691788 Caenorhabditis elegans
Exon216564   192   V: 18692381-18692572 Caenorhabditis elegans
Exon216567   200   V: 18693342-18693541 Caenorhabditis elegans
Exon216571   586   V: 18695530-18696115 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69H2.7a.1 18690032 18696115 1

1 Sequence

Length
1608

1 Sequence Ontology Term

Identifier Name Description
transcript