WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69H2.8.1 Sequence Name  Y69H2.8.1
Length (nt)  1027   Chromosome Location  V: 18699451-18700992
Chromosome . Primary Identifier  V Chromosome Location . Start  18699451
Chromosome Location . End  18700992 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69H2.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013483 nhr-241 Y69H2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69H2.8 Y69H2.8 996   V: 18699451-18699655

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69H2.8.1 18699451 18700992 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216573   205   V: 18699451-18699655 Caenorhabditis elegans
Exon216574   66   V: 18699700-18699765 Caenorhabditis elegans
Exon216575   69   V: 18699820-18699888 Caenorhabditis elegans
Exon216576   325   V: 18700204-18700528 Caenorhabditis elegans
Exon216577   113   V: 18700580-18700692 Caenorhabditis elegans
Exon216578   249   V: 18700744-18700992 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69H2.8.1 18699451 18700992 1

1 Sequence

Length
1027

1 Sequence Ontology Term

Identifier Name Description
transcript