WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y17D7C.1a.1 Sequence Name  Y17D7C.1a.1
Length (nt)  557   Chromosome Location  V: 18707796-18708550
Chromosome . Primary Identifier  V Chromosome Location . Start  18707796
Chromosome Location . End  18708550 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y17D7C.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012455 Y17D7C.1 Y17D7C.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17D7C.1a Y17D7C.1a 237   V: 18707984-18708057

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y17D7C.1a.1 18707796 18708550 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216589   86   V: 18707796-18707881 Caenorhabditis elegans
Exon216591   121   V: 18707937-18708057 Caenorhabditis elegans
Exon216593   112   V: 18708117-18708228 Caenorhabditis elegans
Exon216596   238   V: 18708313-18708550 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y17D7C.1a.1 18707796 18708550 1

1 Sequence

Length
557

1 Sequence Ontology Term

Identifier Name Description
transcript