WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00077656 Gene Name  F11D11.17
Sequence Name  ? F11D11.17 Organism  Caenorhabditis elegans
Automated Description  Is affected by mrps-5 based on microarray studies. Biotype  SO:0000336
Genetic Position  :± Length (nt)  ? 245
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00077656

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

20 Allele

Public Name
gk963271
gk963489
gk963304
gk963809
gk963637
WBVar02124841
gk963292
WBVar02120719
gk962724
WBVar02120528
gk963480
WBVar02123778
WBVar02122704
WBVar02124975
WBVar02122873
WBVar00091258
gk661104
WBVar02078856
WBVar00224623
WBVar00224622

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00077656 18764237 18764481 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_18763527..18764236   710 V: 18763527-18764236 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in mrps-5(RNAi) comparing to in control animals. Fold change > 4, p-value < 0.01 WBPaper00056330:mrps-5(RNAi)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00077656 18764237 18764481 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
245

1 Sequence Ontology Term