WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54E10.3.1 Sequence Name  C54E10.3.1
Length (nt)  957   Chromosome Location  V: 18811005-18813481
Chromosome . Primary Identifier  V Chromosome Location . Start  18811005
Chromosome Location . End  18813481 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54E10.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008308 C54E10.3 C54E10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54E10.3 C54E10.3 957   V: 18811005-18811293

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54E10.3.1 18811005 18813481 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216771   289   V: 18811005-18811293 Caenorhabditis elegans
Exon216772   98   V: 18811452-18811549 Caenorhabditis elegans
Exon216773   188   V: 18811660-18811847 Caenorhabditis elegans
Exon216775   202   V: 18812516-18812717 Caenorhabditis elegans
Exon216777   93   V: 18813245-18813337 Caenorhabditis elegans
Exon216780   87   V: 18813395-18813481 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54E10.3.1 18811005 18813481 1

1 Sequence

Length
957

1 Sequence Ontology Term

Identifier Name Description
transcript