WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54E10.7.1 Sequence Name  C54E10.7.1
Length (nt)  729   Chromosome Location  V: 18811660-18819410
Chromosome . Primary Identifier  V Chromosome Location . Start  18811660
Chromosome Location . End  18819410 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54E10.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00195058 C54E10.7 C54E10.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54E10.7 C54E10.7 159   V: 18819065-18819138

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54E10.7.1 18811660 18819410 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216774   188   V: 18811660-18811847 Caenorhabditis elegans
Exon216776   202   V: 18812516-18812717 Caenorhabditis elegans
Exon216778   93   V: 18813245-18813337 Caenorhabditis elegans
Exon216779   66   V: 18813395-18813460 Caenorhabditis elegans
Exon216781   4   V: 18813652-18813655 Caenorhabditis elegans
Exon216801   91   V: 18819048-18819138 Caenorhabditis elegans
Exon216802   85   V: 18819326-18819410 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54E10.7.1 18811660 18819410 1

1 Sequence

Length
729

1 Sequence Ontology Term

Identifier Name Description
transcript