WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y17D7A.4.1 Sequence Name  Y17D7A.4.1
Length (nt)  1579   Chromosome Location  V: 18832264-18837225
Chromosome . Primary Identifier  V Chromosome Location . Start  18832264
Chromosome Location . End  18837225 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y17D7A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012448 cyp-33D3 Y17D7A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17D7A.4 Y17D7A.4 1488   V: 18832327-18832605

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y17D7A.4.1 18832264 18837225 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216826   342   V: 18832264-18832605 Caenorhabditis elegans
Exon216827   349   V: 18833386-18833734 Caenorhabditis elegans
Exon216828   299   V: 18834635-18834933 Caenorhabditis elegans
Exon216829   135   V: 18835562-18835696 Caenorhabditis elegans
Exon216831   227   V: 18836654-18836880 Caenorhabditis elegans
Exon216832   227   V: 18836999-18837225 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y17D7A.4.1 18832264 18837225 -1

1 Sequence

Length
1579

1 Sequence Ontology Term

Identifier Name Description
transcript