WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y80D3A.2a Sequence Name  Y80D3A.2a
Length (nt)  4404   Chromosome Location  V: 18860750-18860898
Chromosome . Primary Identifier  V Chromosome Location . Start  18860750
Chromosome Location . End  18860898
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y80D3A.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40670 EMB-4, isoform a 170.2 1467 Caenorhabditis elegans
 

Other

29 RNAi

WormBase ID
WBRNAi00009431
WBRNAi00009432
WBRNAi00027549
WBRNAi00027550
WBRNAi00026973
WBRNAi00026974
WBRNAi00026975
WBRNAi00058550
WBRNAi00110691
WBRNAi00021514
WBRNAi00021515
WBRNAi00022501
WBRNAi00022502
WBRNAi00026969
WBRNAi00026970
WBRNAi00097179
WBRNAi00083663
WBRNAi00083760
WBRNAi00007351
WBRNAi00110689
WBRNAi00080072
WBRNAi00075532
WBRNAi00080156
WBRNAi00097224
WBRNAi00097269
WBRNAi00097314
WBRNAi00103627
WBRNAi00081654
WBRNAi00110690

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y80D3A.2a 18860750 18860898 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001258 emb-4 Y80D3A.2 Caenorhabditis elegans

19 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y80D3A.2a 18860750 18860898 -1
CDS:Y80D3A.2a 18861692 18861869 -1
CDS:Y80D3A.2a 18864883 18865185 -1
CDS:Y80D3A.2a 18867290 18867460 -1
CDS:Y80D3A.2a 18868111 18868206 -1
CDS:Y80D3A.2a 18870906 18870981 -1
CDS:Y80D3A.2a 18872626 18872966 -1
CDS:Y80D3A.2a 18877016 18877147 -1
CDS:Y80D3A.2a 18877193 18877321 -1
CDS:Y80D3A.2a 18879047 18879525 -1
CDS:Y80D3A.2a 18881551 18881928 -1
CDS:Y80D3A.2a 18884423 18884658 -1
CDS:Y80D3A.2a 18885847 18886117 -1
CDS:Y80D3A.2a 18886731 18887009 -1
CDS:Y80D3A.2a 18889773 18889997 -1
CDS:Y80D3A.2a 18892425 18892673 -1
CDS:Y80D3A.2a 18893450 18893757 -1
CDS:Y80D3A.2a 18894496 18894830 -1
CDS:Y80D3A.2a 18894900 18894968 -1

1 Sequence

Length
4404

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y80D3A.2a.1 Y80D3A.2a.1 4875   V: 18860285-18894974