WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y80D3A.9 Sequence Name  Y80D3A.9
Length (nt)  840   Chromosome Location  V: 18953146-18953284
Chromosome . Primary Identifier  V Chromosome Location . Start  18953146
Chromosome Location . End  18953284
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y80D3A.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24678 HRG-10 32.0 279 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00058557
WBRNAi00037893

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y80D3A.9 18953146 18953284 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013587 hrg-10 Y80D3A.9 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y80D3A.9 18953146 18953284 -1
CDS:Y80D3A.9 18953381 18953479 -1
CDS:Y80D3A.9 18954403 18954556 -1
CDS:Y80D3A.9 18954791 18954873 -1
CDS:Y80D3A.9 18956130 18956241 -1
CDS:Y80D3A.9 18956288 18956410 -1
CDS:Y80D3A.9 18957177 18957306 -1

1 Sequence

Length
840

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y80D3A.9.1 Y80D3A.9.1 879   V: 18953118-18957317