WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39B6A.43b.1 Sequence Name  Y39B6A.43b.1
Length (nt)  2360   Chromosome Location  V: 18960967-18967829
Chromosome . Primary Identifier  V Chromosome Location . Start  18960967
Chromosome Location . End  18967829 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39B6A.43b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012701 Y39B6A.43 Y39B6A.43 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39B6A.43b Y39B6A.43b 2184   V: 18961101-18961416

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39B6A.43b.1 18960967 18967829 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216964   450   V: 18960967-18961416 Caenorhabditis elegans
Exon216967   198   V: 18961551-18961748 Caenorhabditis elegans
Exon216970   306   V: 18963637-18963942 Caenorhabditis elegans
Exon216973   137   V: 18964000-18964136 Caenorhabditis elegans
Exon216976   144   V: 18964297-18964440 Caenorhabditis elegans
Exon216979   185   V: 18964911-18965095 Caenorhabditis elegans
Exon216982   150   V: 18965480-18965629 Caenorhabditis elegans
Exon216985   165   V: 18966282-18966446 Caenorhabditis elegans
Exon216989   358   V: 18966505-18966862 Caenorhabditis elegans
Exon216991   113   V: 18967507-18967619 Caenorhabditis elegans
Exon216993   154   V: 18967676-18967829 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39B6A.43b.1 18960967 18967829 -1

1 Sequence

Length
2360

1 Sequence Ontology Term

Identifier Name Description
transcript