WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39B6A.42 Sequence Name  Y39B6A.42
Length (nt)  318   Chromosome Location  V: 18968068-18968162
Chromosome . Primary Identifier  V Chromosome Location . Start  18968068
Chromosome Location . End  18968162
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39B6A.42

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29877 Y39B6A.42 11.3 105 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00095780
WBRNAi00056202
WBRNAi00033245
WBRNAi00108909
WBRNAi00108964
WBRNAi00109019
WBRNAi00109072
WBRNAi00108854

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39B6A.42 18968068 18968162 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012700 Y39B6A.42 Y39B6A.42 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39B6A.42 18968068 18968162 -1
CDS:Y39B6A.42 18969297 18969519 -1

1 Sequence

Length
318

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39B6A.42.1 Y39B6A.42.1 548   V: 18967905-18969640
Transcript:Y39B6A.42.2 Y39B6A.42.2 503   V: 18967905-18969541