WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39B6A.35.1 Sequence Name  Y39B6A.35.1
Length (nt)  1215   Chromosome Location  V: 18998345-19000918
Chromosome . Primary Identifier  V Chromosome Location . Start  18998345
Chromosome Location . End  19000918 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39B6A.35.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006567 tgt-2 Y39B6A.35 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39B6A.35 Y39B6A.35 1122   V: 18998346-18998879

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39B6A.35.1 18998345 19000918 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217045   535   V: 18998345-18998879 Caenorhabditis elegans
Exon217046   189   V: 18999642-18999830 Caenorhabditis elegans
Exon217047   491   V: 19000428-19000918 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39B6A.35.1 18998345 19000918 1

1 Sequence

Length
1215

1 Sequence Ontology Term

Identifier Name Description
transcript