WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39B6A.23.1 Sequence Name  Y39B6A.23.1
Length (nt)  1216   Chromosome Location  V: 19039030-19042605
Chromosome . Primary Identifier  V Chromosome Location . Start  19039030
Chromosome Location . End  19042605 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39B6A.23.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012682 asp-16 Y39B6A.23 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39B6A.23 Y39B6A.23 1188   V: 19039058-19039423

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39B6A.23.1 19039030 19042605 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217118   394   V: 19039030-19039423 Caenorhabditis elegans
Exon217119   822   V: 19041784-19042605 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39B6A.23.1 19039030 19042605 -1

1 Sequence

Length
1216

1 Sequence Ontology Term

Identifier Name Description
transcript