WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39B6A.13.1 Sequence Name  Y39B6A.13.1
Length (nt)  730   Chromosome Location  V: 19118505-19119425
Chromosome . Primary Identifier  V Chromosome Location . Start  19118505
Chromosome Location . End  19119425 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39B6A.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012675 Y39B6A.13 Y39B6A.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39B6A.13 Y39B6A.13 627   V: 19118543-19118617

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39B6A.13.1 19118505 19119425 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217209   113   V: 19118505-19118617 Caenorhabditis elegans
Exon217210   162   V: 19118668-19118829 Caenorhabditis elegans
Exon217211   213   V: 19118879-19119091 Caenorhabditis elegans
Exon217212   140   V: 19119141-19119280 Caenorhabditis elegans
Exon217213   102   V: 19119324-19119425 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39B6A.13.1 19118505 19119425 -1

1 Sequence

Length
730

1 Sequence Ontology Term

Identifier Name Description
transcript