WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39B6A.6 Sequence Name  Y39B6A.6
Length (nt)  966   Chromosome Location  V: 19154122-19154243
Chromosome . Primary Identifier  V Chromosome Location . Start  19154122
Chromosome Location . End  19154243
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39B6A.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21670 TSP-13 36.9 321 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056211
WBRNAi00009760
WBRNAi00036913

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39B6A.6 19154122 19154243 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006639 tsp-13 Y39B6A.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39B6A.6 19154122 19154243 1
CDS:Y39B6A.6 19154901 19155062 1
CDS:Y39B6A.6 19155239 19155345 1
CDS:Y39B6A.6 19155498 19155616 1
CDS:Y39B6A.6 19156565 19156676 1
CDS:Y39B6A.6 19156809 19156893 1
CDS:Y39B6A.6 19156944 19157073 1
CDS:Y39B6A.6 19157507 19157635 1

1 Sequence

Length
966

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39B6A.6.1 Y39B6A.6.1 1065   V: 19154106-19157718