WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T26H2.9a.1 Sequence Name  T26H2.9a.1
Length (nt)  1473   Chromosome Location  V: 19207676-19211895
Chromosome . Primary Identifier  V Chromosome Location . Start  19207676
Chromosome Location . End  19211895 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T26H2.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003669 nhr-79 T26H2.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T26H2.9a T26H2.9a 1392   V: 19207750-19208000

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T26H2.9a.1 19207676 19211895 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217313   325   V: 19207676-19208000 Caenorhabditis elegans
Exon217316   116   V: 19208308-19208423 Caenorhabditis elegans
Exon217318   129   V: 19208475-19208603 Caenorhabditis elegans
Exon217320   65   V: 19208844-19208908 Caenorhabditis elegans
Exon217321   132   V: 19209102-19209233 Caenorhabditis elegans
Exon217323   146   V: 19209742-19209887 Caenorhabditis elegans
Exon217325   210   V: 19210403-19210612 Caenorhabditis elegans
Exon217327   111   V: 19210657-19210767 Caenorhabditis elegans
Exon217329   66   V: 19211454-19211519 Caenorhabditis elegans
Exon217331   91   V: 19211568-19211658 Caenorhabditis elegans
Exon217334   82   V: 19211814-19211895 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T26H2.9a.1 19207676 19211895 -1

1 Sequence

Length
1473

1 Sequence Ontology Term

Identifier Name Description
transcript