WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39B6A.2a Sequence Name  Y39B6A.2a
Length (nt)  1491   Chromosome Location  V: 19190555-19190678
Chromosome . Primary Identifier  V Chromosome Location . Start  19190555
Chromosome Location . End  19190678
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39B6A.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36619 PPH-5, isoform a 56.4 496 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00056171
WBRNAi00106365
WBRNAi00020379
WBRNAi00036918
WBRNAi00089528
WBRNAi00089534
WBRNAi00089541
WBRNAi00089547
WBRNAi00089533
WBRNAi00089536
WBRNAi00089535
WBRNAi00089537
WBRNAi00089540
WBRNAi00089546
WBRNAi00089548
WBRNAi00089549

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39B6A.2a 19190555 19190678 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012665 pph-5 Y39B6A.2 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39B6A.2a 19190555 19190678 1
CDS:Y39B6A.2a 19190737 19190984 1
CDS:Y39B6A.2a 19191616 19191795 1
CDS:Y39B6A.2a 19192465 19192707 1
CDS:Y39B6A.2a 19193537 19193785 1
CDS:Y39B6A.2a 19195235 19195344 1
CDS:Y39B6A.2a 19196899 19197151 1
CDS:Y39B6A.2a 19198840 19198923 1

1 Sequence

Length
1491

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39B6A.2a.1 Y39B6A.2a.1 1848   V: 19190547-19199272