WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T26H2.8.1 Sequence Name  T26H2.8.1
Length (nt)  1308   Chromosome Location  V: 19213667-19217176
Chromosome . Primary Identifier  V Chromosome Location . Start  19213667
Chromosome Location . End  19217176 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T26H2.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005653 srr-2 T26H2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T26H2.8 T26H2.8 1164   V: 19213685-19213930

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T26H2.8.1 19213667 19217176 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217335   264   V: 19213667-19213930 Caenorhabditis elegans
Exon217336   112   V: 19214199-19214310 Caenorhabditis elegans
Exon217337   70   V: 19214357-19214426 Caenorhabditis elegans
Exon217338   79   V: 19214474-19214552 Caenorhabditis elegans
Exon217339   172   V: 19215307-19215478 Caenorhabditis elegans
Exon217340   137   V: 19216065-19216201 Caenorhabditis elegans
Exon217341   147   V: 19216245-19216391 Caenorhabditis elegans
Exon217342   327   V: 19216850-19217176 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T26H2.8.1 19213667 19217176 -1

1 Sequence

Length
1308

1 Sequence Ontology Term

Identifier Name Description
transcript