WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T26H2.9b.1 Sequence Name  T26H2.9b.1
Length (nt)  1391   Chromosome Location  V: 19207686-19211888
Chromosome . Primary Identifier  V Chromosome Location . Start  19207686
Chromosome Location . End  19211888 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T26H2.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003669 nhr-79 T26H2.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T26H2.9b T26H2.9b 942   V: 19208493-19208603

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T26H2.9b.1 19207686 19211888 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217368   315   V: 19207686-19208000 Caenorhabditis elegans
Exon217371   116   V: 19208308-19208423 Caenorhabditis elegans
Exon217373   129   V: 19208475-19208603 Caenorhabditis elegans
Exon217376   132   V: 19209102-19209233 Caenorhabditis elegans
Exon217378   146   V: 19209742-19209887 Caenorhabditis elegans
Exon217380   210   V: 19210403-19210612 Caenorhabditis elegans
Exon217382   111   V: 19210657-19210767 Caenorhabditis elegans
Exon217384   66   V: 19211454-19211519 Caenorhabditis elegans
Exon217386   91   V: 19211568-19211658 Caenorhabditis elegans
Exon217387   75   V: 19211814-19211888 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T26H2.9b.1 19207686 19211888 -1

1 Sequence

Length
1391

1 Sequence Ontology Term

Identifier Name Description
transcript