WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55C9.11.1 Sequence Name  F55C9.11.1
Length (nt)  2963   Chromosome Location  V: 19306594-19309691
Chromosome . Primary Identifier  V Chromosome Location . Start  19306594
Chromosome Location . End  19309691 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55C9.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010107 F55C9.11 F55C9.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55C9.11 F55C9.11 174   V: 19307366-19307453

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55C9.11.1 19306594 19309691 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217494   690   V: 19306594-19307283 Caenorhabditis elegans
Exon217496   124   V: 19307330-19307453 Caenorhabditis elegans
Exon217497   2055   V: 19307498-19309552 Caenorhabditis elegans
Exon217500   94   V: 19309598-19309691 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55C9.11.1 19306594 19309691 -1

1 Sequence

Length
2963

1 Sequence Ontology Term

Identifier Name Description
transcript