WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14B4.2.2 Sequence Name  C14B4.2.2
Length (nt)  5745   Chromosome Location  V: 19332354-19349500
Chromosome . Primary Identifier  V Chromosome Location . Start  19332354
Chromosome Location . End  19349500 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14B4.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007583 C14B4.2 C14B4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14B4.2 C14B4.2 5331   V: 19332755-19333100

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C14B4.2.2 19332354 19349500 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217583   747   V: 19332354-19333100 Caenorhabditis elegans
Exon217586   255   V: 19334923-19335177 Caenorhabditis elegans
Exon217588   191   V: 19335461-19335651 Caenorhabditis elegans
Exon217590   785   V: 19336801-19337585 Caenorhabditis elegans
Exon217592   321   V: 19338492-19338812 Caenorhabditis elegans
Exon217594   205   V: 19339375-19339579 Caenorhabditis elegans
Exon217600   387   V: 19340228-19340614 Caenorhabditis elegans
Exon217606   535   V: 19341835-19342369 Caenorhabditis elegans
Exon217608   388   V: 19343790-19344177 Caenorhabditis elegans
Exon217610   539   V: 19344710-19345248 Caenorhabditis elegans
Exon217612   257   V: 19345514-19345770 Caenorhabditis elegans
Exon217614   542   V: 19346912-19347453 Caenorhabditis elegans
Exon217617   274   V: 19348585-19348858 Caenorhabditis elegans
Exon217619   99   V: 19348905-19349003 Caenorhabditis elegans
Exon217621   120   V: 19349196-19349315 Caenorhabditis elegans
Exon217623   100   V: 19349401-19349500 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C14B4.2.2 19332354 19349500 -1

1 Sequence

Length
5745

1 Sequence Ontology Term

Identifier Name Description
transcript