WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14B4.2.1 Sequence Name  C14B4.2.1
Length (nt)  5808   Chromosome Location  V: 19332354-19362668
Chromosome . Primary Identifier  V Chromosome Location . Start  19332354
Chromosome Location . End  19362668 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14B4.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007583 C14B4.2 C14B4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14B4.2 C14B4.2 5331   V: 19332755-19333100

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C14B4.2.1 19332354 19362668 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217584   747   V: 19332354-19333100 Caenorhabditis elegans
Exon217585   255   V: 19334923-19335177 Caenorhabditis elegans
Exon217587   191   V: 19335461-19335651 Caenorhabditis elegans
Exon217589   785   V: 19336801-19337585 Caenorhabditis elegans
Exon217591   321   V: 19338492-19338812 Caenorhabditis elegans
Exon217593   205   V: 19339375-19339579 Caenorhabditis elegans
Exon217599   387   V: 19340228-19340614 Caenorhabditis elegans
Exon217605   535   V: 19341835-19342369 Caenorhabditis elegans
Exon217607   388   V: 19343790-19344177 Caenorhabditis elegans
Exon217609   539   V: 19344710-19345248 Caenorhabditis elegans
Exon217611   257   V: 19345514-19345770 Caenorhabditis elegans
Exon217613   542   V: 19346912-19347453 Caenorhabditis elegans
Exon217616   274   V: 19348585-19348858 Caenorhabditis elegans
Exon217618   99   V: 19348905-19349003 Caenorhabditis elegans
Exon217620   120   V: 19349196-19349315 Caenorhabditis elegans
Exon217622   93   V: 19349401-19349493 Caenorhabditis elegans
Exon217624   70   V: 19362599-19362668 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C14B4.2.1 19332354 19362668 -1

1 Sequence

Length
5808

1 Sequence Ontology Term

Identifier Name Description
transcript